Bryophyte Checklist of SYKO Herbarium

Checklist
Versão mais recente published by Institute of Biology of Komi Scientific Centre of the Ural Branch of the Russian Academy of Sciences on ago 21, 2020 Institute of Biology of Komi Scientific Centre of the Ural Branch of the Russian Academy of Sciences

Baixe a última versão do recurso de dados, como um Darwin Core Archive (DwC-A) ou recurso de metadados, como EML ou RTF:

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Descrição

The checklist is based on occurrence dataset SYKO Herbarium Moss Collection (https://doi.org/10.15468/yjdjs4)

Registros de Dados

Os dados deste recurso de checklist foram publicados como um Darwin Core Archive (DwC-A), que é o formato padronizado para compartilhamento de dados de biodiversidade como um conjunto de uma ou mais tabelas de dados. A tabela de dados do núcleo contém 599 registros.

This IPT archives the data and thus serves as the data repository. The data and resource metadata are available for download in the downloads section. The versions table lists other versions of the resource that have been made publicly available and allows tracking changes made to the resource over time.

Versões

A tabela abaixo mostra apenas versões de recursos que são publicamente acessíveis.

Como citar

Pesquisadores deveriam citar esta obra da seguinte maneira:

Zheleznova G, Shubina T, Rubtsov M, Litvinenko G, Chadin I (2020): Bryophyte Checklist of SYKO Herbarium. v1.2. Institute of Biology of Komi Scientific Centre of the Ural Branch of the Russian Academy of Sciences. Dataset/Checklist. http://ib.komisc.ru:8088/ipt/resource?r=bryophyte_checklist_syko&v=1.2

Direitos

Pesquisadores devem respeitar a seguinte declaração de direitos:

O editor e o detentor dos direitos deste trabalho é Institute of Biology of Komi Scientific Centre of the Ural Branch of the Russian Academy of Sciences. This work is licensed under a Creative Commons Attribution (CC-BY 4.0) License.

GBIF Registration

Este recurso foi registrado no GBIF e atribuído ao seguinte GBIF UUID: d5a07901-27f3-4100-99fb-e393097f6233.  Institute of Biology of Komi Scientific Centre of the Ural Branch of the Russian Academy of Sciences publica este recurso, e está registrado no GBIF como um publicador de dados aprovado por Participant Node Managers Committee.

Palavras-chave

Checklist; Inventorythematic; Mosses; Liverworts; Bryophytes; Collection; SYKO Herbarium; Russia

Contatos

Galina Zheleznova
  • Originador
  • researcher
Institute of Biology of Komi Scientific Centre of the Ural Branch of the Russian Academy of Sciences
  • Kommunisticheskaya, 28
167000 Syktyvkar
Komi Republic
RU
  • +78212245202
Tatyana Shubina
  • Originador
  • Ponto De Contato
  • researcher
Institute of Biology of Komi Scientific Centre of the Ural Branch of the Russian Academy of Sciences
  • Syktyvkar
167000 Syktyvkar
Komi Republic
RU
  • +78212245202
Mikhail Rubtsov
  • Originador
  • engineer
Institute of Biology of Komi Scientific Centre of the Ural Branch of the Russian Academy of Sciences
  • Kommunisticheskaya, 28
Syktyvkar
Komi Republic
RU
  • +78212216752
Galina Litvinenko
  • Originador
  • technician
  • Kommunisticheskaya, 28
167000 Syktyvkar
Komi Republic
RU
  • +78212241168
Ivan Chadin
  • Usuário
  • Deputy Director
Institute of Biology of Komi Scientific Centre of the Ural Branch of the Russian Academy of Sciences
  • Kommunisticheskaya, 28
167000 Syktyvkar
RU
  • +78212240525
Ivan Chadin

Cobertura Geográfica

Most of the dataset records originated from samples collected on the territory of European North-East Russia. Only one occurrence was located far from this region on the Kamchatka Peninsula (55.72222ºN, 160.3714ºE).

Coordenadas delimitadoras Sul Oeste [59,23, 46,55], Norte Leste [70,72, 68,63]

Cobertura Taxonômica

The dataset consists of 480 moss taxa with rank of species, subspecies, varieties and 325 occurrences of 59 liverworts taxa of the same ranks. The moss species names used were determined according to the ‘Check-list of mosses of East Europe and North Asia’ (Ignatov et al. 2006), and ‘An annotated checklist of bryophytes of Europe, Macaronesia and Cyprus’ (Hodgetts et al. 2020).

Filo Bryophyta (Mosses)

Cobertura Temporal

Data Inicial / Data final 1933-01-01 / 2019-01-01

Dados Sobre o Projeto

The herbarium labels for this dataset were mobilized with support from The Global Biodiversity Information Facility Secretariat (GBIFS). Project ID: Russia2019_04. Project web-page: https://www.gbif.org/project/5ZsAifyI6z0OguyoNTFIIu/mobilizing-moss-occurrences-from-the-komi-science-centre-herbarium. Duration: 01.02.2019-30.09.2019. The aim of the project to digitize at least 8,000 labels from the SYKO herbarium moss collection. As a result of the project 14,000 labels were digitized and the final version (1.5) of published in GBIF dataset contained 14,871 moss occurrences. The project team consisted of 5 people.

Título European North-East Russia mosses occurrence data mobilization on the base of SYKO herbarium mosses collection
Identificador Russia2019_04
Financiamento The Global Biodiversity Information Facility Secretariat (GBIFS)

O pessoal envolvido no projeto:

Galina Litvinenko
  • Usuário
Mikhail Rubtsov
  • Provedor De Conteúdo

Métodos de Amostragem

Bryophyte herbarium samples were collected during two main types of field work: floristic explorations and vegetation studies. Field samples are separated into storage specimens during the species identification in a way that in each specimen was a minimum number of bryophyte species. Two label copies are generated for each sample. One copy of the label was fixed on a bag with a dried moss sample, the second was stored in a separate storage for labels (library card catalog cabinet is used). The labels and the moss specimens themselves were arranged in alphabetical order of species names. Each moss sample was assigned a catalog number. The catalog numbers were incrementing since the organization of the bryophyte subdivision in the SYKO herbarium. Information about the label catalog number, date of collection, name of the collection place, species name, field number, and habitat were entered in the register books. The labels from label storage were used for digitization. The label images were obtained with digital camera. Images were uploaded to server and their filenames to the label database. The database web interface written specifically for this project was used for manual label data recognition and interpretation. The following minimum set of data were deciphered (in DarwinCore terms): scientificName, recordedBy, identifiedBy, day, month, year, catalogNumber, decimalLatitude, decimalLongitude. The digitization of most moss collection labels showed that names of 139 collectors were on the labels and 38 botanists were engaged in species identification. The most productive collector and botanist most engaged in species identification was one person — G. V. Zheleznova.

Área de Estudo Bryophytes subdivision of SYKO is divided into two collections: mosses and liverworts. The digitizing of liverworts label data was not a priority. However, some occurrences of liverworts were added in dataset as a result of its simultaneous keeping in one specimen packet with mosses. The labels of liverworts collection are planned to be digitized in the near future. According to SYKO bryophytes subdivision register (maintained manually since 1969) there were 58,184 specimens (45,198 mosses and 12,986 liverworts) at the beginning of August 2020. The label data of 42,698 unique moss samples (94 percent of moss collection) were digitized to the date. There was 1,697 moss storage units with duplicates which are also stored in the main collection and serve for exchange with other institutions. The duplicates weren't used for the described occurrence dataset preparation. The collection of mosses is characterized by the presence of from 1 to 9 species in one specimen (1.2 on average). Some portion of digitized labels were excluded from the described dataset. This 2,754 labels were used for updating of dataset “Moss occurrences in Yugyd Va National Park, Subpolar and Northern Urals, European North-East Russia” published earlier. The images for 3,452 published earlier occurrences were added in field “associatedMedia” for the Yugyd Va dataset.
Controle de Qualidade Species identification. The species were identified by bryologists from the Institute of Biology of Komi Scientific Centre of the Ural Branch of the Russian Academy of Sciences. The correctness of species identification and confirmation for many taxa was carried out by well-known taxonomy specialists: Shljakov R.N. (378 identifications), Abramova A.L. (246 identifications), Savich L.I. (110 identifications),    Ignatov M.S. (58 identifications), Afonina O.M. (52 identifications), Ignatova E.A. (49 identifications), Chernjadeva I.V. (16 identifications), Smirnova Z.N. (15 identifications), Fedosov    V.Je. (11 identifications), Abramov I.I. (10 identifications) and Maksimov A.I. (2 identifications). Some moss samples were sent for critical review to other herbaria. For example, the specimens with genera Pohlia Hedw., Stereodon (Brid.) Mitt., Hypnum Hedw., Cratoneuron (Sull.) Spruce, Hygrohypnum Lindb., Tortella (Müll.Hal.) Limpr., Pseudoleskeella Ignatov & Ignatova were sent to the Komarov Botanical Institute herbarium (LE), Grimmia Hedw., Schistidium Bruch & Schimp., Philonotis Brid., Bryum Hedw., Bucklandiella Roiv., Polytrichum Hedw., Lescuraea Bruch & Schimp., Sciuro-hypnum (Hampe) Hampe to The Tsytsin Main Moscow Botanical Garden of Academy of Sciences herbarium (MHA), genera Encalypta Hedw., Seligeria Bruch & Schimp. to the herbarium of Moscow University (MW).

Descrição dos passos do método:

  1. The checklist was prepared after generation of occurrence dataset SYKO Herbarium Moss Collection (https://doi.org/10.15468/yjdjs4) with SQL query.

Dados de Coleção

Nome da Coleção The herbarium Institute of Biology of Komi Science Centre of the Ural Branch of the Russian Academy of Sciences
Identificador da Coleção SYKO
Métodos de preservação do espécime Seco e prensado
Unidades de Curadoria Entre 57.000 e 2.000 specimens

Citações bibliográficas

  1. Ignatov M, Afonina O, Ignatova E, Abolina AA, Akatova T, Baisheva E, Bardunov L, Baryakina EA, Belkina O, Bezgodov A, Boychuk M, Cherdantseva V, Czernyadjeva I,Doroshina G, Dyachenko A, Fedosov V, Goldberg IL, Ivanova EI, Jukoniene II, Kannukene LI, Kazanovsky S, Kharzinov ZK, Kurbatova LE, Maksimov A, Mamatkulov, UK, Manakyan V, Maslovsky OM, Napreenko MG, Otnyukova T, Partyka LY, Pisarenko O, Popova N, Rykovsky GF, Tubanova D, Zheleznova G, Zolotov V (2006) Checklist of mosses of East Europe and North Asia. Arctoa 15 (1): 1‑130. https://doi.org/10.15298/arctoa.15.01 10.15298/arctoa.15.01
  2. N. G. Hodgetts, L. Söderström, T. L. Blockeel, S. Caspari, M. S. Ignatov, N.A. Konstantinova, N. Lockhart, B. Papp, C. Schröck, M. Sim-Sim, D. Bell, N. E. Bell, H. H. Blom, M. A. Bruggeman-Nannenga, M. Brugués, J. Enroth, K. I. Flatberg, R. Garilleti, L. Hedenäs, D. T. Holyoak, V. Hugonnot, I. Kariyawasam, H. Köckinger, J. Kučera, F. Lara & R. D. Porley (2020) An annotated checklist of bryophytes of Europe, Macaronesia and Cyprus, Journal of Bryology, 42:1, 1-116, DOI: 10.1080/03736687.2019.1694329 10.1080/03736687.2019.1694329
  3. Ignatov M. S. Milyutina I. A. 2007. A revision of the genus Sciuro-Hypnum (Brachytheciaceae, Bryophyta) in Russia // Arctoa Vol. 16 Р. 63-86. DOI: 10.15298/arctoa.16.06 10.15298/arctoa.16.06

Metadados Adicionais

Identificadores alternativos d5a07901-27f3-4100-99fb-e393097f6233
http://ib.komisc.ru:8088/ipt/resource?r=bryophyte_checklist_syko