Description
The checklist is based on occurrence dataset SYKO Herbarium Moss Collection (https://doi.org/10.15468/yjdjs4)
Enregistrements de données
Les données de cette ressource checklist ont été publiées sous forme d'une Archive Darwin Core (Darwin Core Archive ou DwC-A), le format standard pour partager des données de biodiversité en tant qu'ensemble d'un ou plusieurs tableurs de données. Le tableur de données du cœur de standard (core) contient 599 enregistrements.
Cet IPT archive les données et sert donc de dépôt de données. Les données et métadonnées de la ressource sont disponibles pour téléchargement dans la section téléchargements. Le tableau des versions liste les autres versions de chaque ressource rendues disponibles de façon publique et permet de tracer les modifications apportées à la ressource au fil du temps.
Versions
Le tableau ci-dessous n'affiche que les versions publiées de la ressource accessibles publiquement.
Comment citer
Les chercheurs doivent citer cette ressource comme suit:
Zheleznova G, Shubina T, Rubtsov M, Litvinenko G, Chadin I (2020): Bryophyte Checklist of SYKO Herbarium. v1.2. Institute of Biology of Komi Scientific Centre of the Ural Branch of the Russian Academy of Sciences. Dataset/Checklist. http://ib.komisc.ru:8088/ipt/resource?r=bryophyte_checklist_syko&v=1.2
Droits
Les chercheurs doivent respecter la déclaration de droits suivante:
L’éditeur et détenteur des droits de cette ressource est Institute of Biology of Komi Scientific Centre of the Ural Branch of the Russian Academy of Sciences. Ce travail est sous licence Creative Commons Attribution (CC-BY) 4.0.
Enregistrement GBIF
Cette ressource a été enregistrée sur le portail GBIF, et possède l'UUID GBIF suivante : d5a07901-27f3-4100-99fb-e393097f6233. Institute of Biology of Komi Scientific Centre of the Ural Branch of the Russian Academy of Sciences publie cette ressource, et est enregistré dans le GBIF comme éditeur de données avec l'approbation du Participant Node Managers Committee.
Mots-clé
Checklist; Inventorythematic; Mosses; Liverworts; Bryophytes; Collection; SYKO Herbarium; Russia
Contacts
- Créateur
- researcher
- Kommunisticheskaya, 28
- +78212245202
- Créateur ●
- Personne De Contact
- researcher
- Syktyvkar
- +78212245202
- Créateur
- engineer
- Kommunisticheskaya, 28
- +78212216752
- Créateur
- technician
- Utilisateur
- Deputy Director
- Kommunisticheskaya, 28
- +78212240525
- Utilisateur
Couverture géographique
Most of the dataset records originated from samples collected on the territory of European North-East Russia. Only one occurrence was located far from this region on the Kamchatka Peninsula (55.72222ºN, 160.3714ºE).
| Enveloppe géographique | Sud Ouest [59,23, 46,55], Nord Est [70,72, 68,63] |
|---|
Couverture taxonomique
The dataset consists of 480 moss taxa with rank of species, subspecies, varieties and 325 occurrences of 59 liverworts taxa of the same ranks. The moss species names used were determined according to the ‘Check-list of mosses of East Europe and North Asia’ (Ignatov et al. 2006), and ‘An annotated checklist of bryophytes of Europe, Macaronesia and Cyprus’ (Hodgetts et al. 2020).
| Phylum | Bryophyta (Mosses) |
|---|
Couverture temporelle
| Date de début / Date de fin | 1933-01-01 / 2019-01-01 |
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Données sur le projet
The herbarium labels for this dataset were mobilized with support from The Global Biodiversity Information Facility Secretariat (GBIFS). Project ID: Russia2019_04. Project web-page: https://www.gbif.org/project/5ZsAifyI6z0OguyoNTFIIu/mobilizing-moss-occurrences-from-the-komi-science-centre-herbarium. Duration: 01.02.2019-30.09.2019. The aim of the project to digitize at least 8,000 labels from the SYKO herbarium moss collection. As a result of the project 14,000 labels were digitized and the final version (1.5) of published in GBIF dataset contained 14,871 moss occurrences. The project team consisted of 5 people.
| Titre | European North-East Russia mosses occurrence data mobilization on the base of SYKO herbarium mosses collection |
|---|---|
| Identifiant | Russia2019_04 |
| Financement | The Global Biodiversity Information Facility Secretariat (GBIFS) |
Les personnes impliquées dans le projet:
- Utilisateur
- Fournisseur De Contenu
Méthodes d'échantillonnage
Bryophyte herbarium samples were collected during two main types of field work: floristic explorations and vegetation studies. Field samples are separated into storage specimens during the species identification in a way that in each specimen was a minimum number of bryophyte species. Two label copies are generated for each sample. One copy of the label was fixed on a bag with a dried moss sample, the second was stored in a separate storage for labels (library card catalog cabinet is used). The labels and the moss specimens themselves were arranged in alphabetical order of species names. Each moss sample was assigned a catalog number. The catalog numbers were incrementing since the organization of the bryophyte subdivision in the SYKO herbarium. Information about the label catalog number, date of collection, name of the collection place, species name, field number, and habitat were entered in the register books. The labels from label storage were used for digitization. The label images were obtained with digital camera. Images were uploaded to server and their filenames to the label database. The database web interface written specifically for this project was used for manual label data recognition and interpretation. The following minimum set of data were deciphered (in DarwinCore terms): scientificName, recordedBy, identifiedBy, day, month, year, catalogNumber, decimalLatitude, decimalLongitude. The digitization of most moss collection labels showed that names of 139 collectors were on the labels and 38 botanists were engaged in species identification. The most productive collector and botanist most engaged in species identification was one person — G. V. Zheleznova.
| Etendue de l'étude | Bryophytes subdivision of SYKO is divided into two collections: mosses and liverworts. The digitizing of liverworts label data was not a priority. However, some occurrences of liverworts were added in dataset as a result of its simultaneous keeping in one specimen packet with mosses. The labels of liverworts collection are planned to be digitized in the near future. According to SYKO bryophytes subdivision register (maintained manually since 1969) there were 58,184 specimens (45,198 mosses and 12,986 liverworts) at the beginning of August 2020. The label data of 42,698 unique moss samples (94 percent of moss collection) were digitized to the date. There was 1,697 moss storage units with duplicates which are also stored in the main collection and serve for exchange with other institutions. The duplicates weren't used for the described occurrence dataset preparation. The collection of mosses is characterized by the presence of from 1 to 9 species in one specimen (1.2 on average). Some portion of digitized labels were excluded from the described dataset. This 2,754 labels were used for updating of dataset “Moss occurrences in Yugyd Va National Park, Subpolar and Northern Urals, European North-East Russia” published earlier. The images for 3,452 published earlier occurrences were added in field “associatedMedia” for the Yugyd Va dataset. |
|---|---|
| Contrôle qualité | Species identification. The species were identified by bryologists from the Institute of Biology of Komi Scientific Centre of the Ural Branch of the Russian Academy of Sciences. The correctness of species identification and confirmation for many taxa was carried out by well-known taxonomy specialists: Shljakov R.N. (378 identifications), Abramova A.L. (246 identifications), Savich L.I. (110 identifications), Ignatov M.S. (58 identifications), Afonina O.M. (52 identifications), Ignatova E.A. (49 identifications), Chernjadeva I.V. (16 identifications), Smirnova Z.N. (15 identifications), Fedosov V.Je. (11 identifications), Abramov I.I. (10 identifications) and Maksimov A.I. (2 identifications). Some moss samples were sent for critical review to other herbaria. For example, the specimens with genera Pohlia Hedw., Stereodon (Brid.) Mitt., Hypnum Hedw., Cratoneuron (Sull.) Spruce, Hygrohypnum Lindb., Tortella (Müll.Hal.) Limpr., Pseudoleskeella Ignatov & Ignatova were sent to the Komarov Botanical Institute herbarium (LE), Grimmia Hedw., Schistidium Bruch & Schimp., Philonotis Brid., Bryum Hedw., Bucklandiella Roiv., Polytrichum Hedw., Lescuraea Bruch & Schimp., Sciuro-hypnum (Hampe) Hampe to The Tsytsin Main Moscow Botanical Garden of Academy of Sciences herbarium (MHA), genera Encalypta Hedw., Seligeria Bruch & Schimp. to the herbarium of Moscow University (MW). |
Description des étapes de la méthode:
- The checklist was prepared after generation of occurrence dataset SYKO Herbarium Moss Collection (https://doi.org/10.15468/yjdjs4) with SQL query.
Données de collection
| Nom de la collection | The herbarium Institute of Biology of Komi Science Centre of the Ural Branch of the Russian Academy of Sciences |
|---|---|
| Identifiant de collection | SYKO |
| Méthode de conservation des spécimens | Dried and pressed |
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| Unités de conservation | Entre (nombre minimal) 57 000 et (nombre maximal) 2 000 specimens |
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Citations bibliographiques
- Ignatov M, Afonina O, Ignatova E, Abolina AA, Akatova T, Baisheva E, Bardunov L, Baryakina EA, Belkina O, Bezgodov A, Boychuk M, Cherdantseva V, Czernyadjeva I,Doroshina G, Dyachenko A, Fedosov V, Goldberg IL, Ivanova EI, Jukoniene II, Kannukene LI, Kazanovsky S, Kharzinov ZK, Kurbatova LE, Maksimov A, Mamatkulov, UK, Manakyan V, Maslovsky OM, Napreenko MG, Otnyukova T, Partyka LY, Pisarenko O, Popova N, Rykovsky GF, Tubanova D, Zheleznova G, Zolotov V (2006) Checklist of mosses of East Europe and North Asia. Arctoa 15 (1): 1‑130. https://doi.org/10.15298/arctoa.15.01 10.15298/arctoa.15.01
- N. G. Hodgetts, L. Söderström, T. L. Blockeel, S. Caspari, M. S. Ignatov, N.A. Konstantinova, N. Lockhart, B. Papp, C. Schröck, M. Sim-Sim, D. Bell, N. E. Bell, H. H. Blom, M. A. Bruggeman-Nannenga, M. Brugués, J. Enroth, K. I. Flatberg, R. Garilleti, L. Hedenäs, D. T. Holyoak, V. Hugonnot, I. Kariyawasam, H. Köckinger, J. Kučera, F. Lara & R. D. Porley (2020) An annotated checklist of bryophytes of Europe, Macaronesia and Cyprus, Journal of Bryology, 42:1, 1-116, DOI: 10.1080/03736687.2019.1694329 10.1080/03736687.2019.1694329
- Ignatov M. S. Milyutina I. A. 2007. A revision of the genus Sciuro-Hypnum (Brachytheciaceae, Bryophyta) in Russia // Arctoa Vol. 16 Р. 63-86. DOI: 10.15298/arctoa.16.06 10.15298/arctoa.16.06
Métadonnées additionnelles
| Identifiants alternatifs | d5a07901-27f3-4100-99fb-e393097f6233 |
|---|---|
| http://ib.komisc.ru:8088/ipt/resource?r=bryophyte_checklist_syko |